Research Tools and Services Discovery

By Resource Group:

By Resource Type:

By Provider:

By Affiliation:

Search Fields (at least one required):
Viewing: 51 - 75 of 145                    Click on a title to view item details.
PonyLinux Cloud Image Indiana University (Indiana U)

This image comes packed with a fun game for learning your way around the command line in Unix! Using ponysay and bash, this game walks you through the basics of command syntax, navigation, and dealing with files.

If you want logins to work and full details, make sure you add this as a deployment script url: https://raw.githubusercontent.com/NCGAS/PonyLinux/master/Developerutilities/jetstreamboot.shRelated Jetstream resources:

Frog Call Analysis Secure Cloud Image Indiana University (Indiana U)

HALF of workflow for bioacoustic analysis by Random Forest. *****Intermittent image to check for security holes.Related Jetstream resources:

System Message: WARNING/2 (<string>, line 1); backlink

Inline strong start-string without end-string.

System Message: WARNING/2 (<string>, line 1); backlink

Inline strong start-string without end-string.

System Message: WARNING/2 (<string>, line 1); backlink

Inline emphasis start-string without end-string.
REUexercise1 Cloud Image Indiana University (Indiana U)

This was an exercise for the REU Jetstream programRelated Jetstream resources:

openmrs-base Cloud Image Indiana University (Indiana U)

The base OpenMRS image for the CICI DynaSWAP projectRelated Jetstream resources:

Frog Call Analysis Cloud Image Indiana University (Indiana U)

HALF of workflow for bioacoustic analysis by Random Forest. Complete with minimalist documentationRelated Jetstream resources:

IU-BL-I535-MGMT-DATA Cloud Image Indiana University (Indiana U)

This is a VM for IU Bloomington class INFO I535 - Management, Access and Uses of Big Data.Related Jetstream resources:

DoaneBIO316_2020 Cloud Image Indiana University (Indiana U)

Ubuntu 18.04 LTS + Xfce desktop, Anaconda Python 3.7, BiopythonRelated Jetstream resources:

Ubuntu 18.04 with Spark Cloud Image Indiana University (Indiana U)

Ubuntu 18.04 with: Jupyter Notebook installed via ezj; Java 8 and Apache Spark installed in /usr/local; findspark, matplotlib, and pyspark installed with conda.

Built on Ubuntu 18.04 Devel and Docker v1.13 (by jfischer).Related Jetstream resources:

vjc_ub1804_with_ezj_rstudio Cloud Image Indiana University (Indiana U)

adds ezj and rstudio server to ubuntu 18.04 with dockerRelated Jetstream resources:

WQmaker 2.31.9 with BUSCO Cloud Image Indiana University (Indiana U)

Updated version of: maker 2.31.9 with CC tools v3.1. This image also contains BUSCO and hhmer to train AugustusRelated Jetstream resources:

PonyLinux Cloud Image Indiana University (Indiana U)

This image comes packed with a little game for learning Unix the fun way! Using ponysay and bash, this game walks you through the basics of command syntax, navigation, and dealing with files.Related Jetstream resources:

Ubuntu Docker and Gsissh Cloud Image Indiana University (Indiana U)

This image has Docker and gsissh installedRelated Jetstream resources:

REU Project Cloud Image Indiana University (Indiana U)

Friday 8 March 2019Related Jetstream resources:

EPIC Modeling and Simulations Cloud Image Indiana University (Indiana U)

Explicit Planetary Isentropic-Coordinate (EPIC) Atmospheric Model Based on Ubuntu 14.04.3 Development Patched up to date as of 1/2/17 Base Ubuntu 14.04.3 + Xfce + Xfce-goodies, firefox, icon sets and themes EPIC 3v9Related Jetstream resources:

Ubuntu 18.04 for SOMOSPIE Cloud Image Indiana University (Indiana U)

Apache Spark, Java, and various Python and R libraries pre-installed for SOMOSPIE (arXiv:1904.07754 [cs.LG]).Related Jetstream resources:

Base for Automated Frog ID Cloud Image Indiana University (Indiana U)

This contains the base webpage, R packages, sample database on postgresql, and documentation for collecting data from Raspberry Pi recording devicesRelated Jetstream resources:

Photoscan_Centos7 Cloud Image Indiana University (Indiana U)

Centos7 GUI development with Agisoft's photoscan preinstalled and configuredRelated Jetstream resources:

Ciliates Popupjb Cloud Image Indiana University (Indiana U)

Current Iteration of JBrowse image end of april 2019Related Jetstream resources:

EDGE_v1 Cloud Image Indiana University (Indiana U)

EDGE bioinformatics websiteRelated Jetstream resources:

bcbio-nextgen Cloud Image Indiana University (Indiana U)

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. You write a high level configuration file specifying your inputs and analysis parameters. This input drives a parallel run that handles distributed execution, idempotent processing restarts and safe transactional steps. bcbio provides a shared community resource that handles the data processing component of sequencing analysis, providing researchers with more time to focus on the downstream biology.Related Jetstream resources:

VJC_R341_Bioc3_6_HSOS_admDec28 Cloud Image Indiana University (Indiana U)

updates Bioc packages and includes HSOS infrastructure of Dec 2017Related Jetstream resources:

pna-agent-tacc Cloud Image Indiana University (Indiana U)

Anaconda python 3.6, OpenMMRelated Jetstream resources:

VJC_R3.4.1_Bioconductor Cloud Image Indiana University (Indiana U)

Includes sufficient infrastructure to run rhdf5clientRelated Jetstream resources:

VJC_R3.4.1_BiocHSOS v.1.1 Cloud Image Indiana University (Indiana U)

Includes sufficient infrastructure to run rhdf5client + HSOSRelated Jetstream resources:

VJC_R3_4_1_BiocHSOS_HDFS v_1_1 Cloud Image Indiana University (Indiana U)

Adding infrastructure to support running hdf server.Related Jetstream resources:


Pages

National Science Foundation (NSF)

© XSEDE All Rights Reserved. Visit the Feedback page for assistance or to provide feedback.
The Extreme Science and Engineering Discovery Environment is supported by the National Science Foundation.
Administrative Login