Research Resource Discovery

Rstudio enabled image used for ACSC-Training.

Rstudio enabled image used for ACSC-Training.

Imported Application - agave_ubuntu1604_docker17.09.0~ce-0~ubuntu

Imported Application - agave_ubuntu1604_docker17.09-ce

Imported Application - agave_ubuntu1604_docker17.09-ce

Docker and Singularity VM for Agave Container workshop at the University of Hawaii.

This is a image with Docker and Singularity that works with the UH HPC for use in a Agave and Containers workshop hosted at UH.

Ubuntu devel + docker, with conda, Jupyter Notebook, and RStudio Server installed, with tidyverse, DESeq2, and tximport.

Anvi’o is an open-source, community-driven analysis and visualization platform for ‘omics data. Documentation- http://merenlab.org/software/anvio/ This image was made by National Center for Genome Analysis Support (NCGAS)- ncgas.org. We will soon have docmentation to use this image. If you have any questions regarding this image email us at help@ncgas.oeg

Imported Application - Apache Bigtop

Worker for workflow

worker for simulations

This image is for Arkansas workshop including transcriptomics and metagenomics software

Rstudio enabled image used for AUCC-Training.

Imported Application - AutoDock Vina Launch at Boot

Imported Application - AutoDock Vina with ChemBridge Data

Unidata AWIPS EDEX Ingest Node (no PostgreSQL or HDF5)

Unidata AWIPS EDEX Standalone Data Server

Unidata AWIPS EDEX Standalone Data Server_o

This contains the base webpage, R packages, sample database on postgresql, and documentation for collecting data from Raspberry Pi recording devices

Designed for use with IU SOIC L533 Systems and Protocol Security and Information Assurance - Dr. Fattaneh Bayatbabolghani ** Requires an m1_medium instance or larger ** Based on Centos 7 (7.4) Development GUI (previously named - Bayatbabolghani/Myers L533 Image) (originally Dr. Steven Myers)

Updated Bayatbabolghani/Myers L533 Image 2 - based on Ubuntu 14

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. You write a high level configuration file specifying your inputs and analysis parameters. This input drives a parallel run that handles distributed execution, idempotent processing restarts and safe transactional steps. bcbio provides a shared community resource that handles the data processing component of sequencing analysis, providing researchers with more time to focus on the downstream biology.

findr+klipRreduce with betaPic 3.9 um fake planets

Has fake planets injected at /findr/Data/fp*