Research Resource Discovery

Viewing: 76 - 100 of 586.

bowtie 1.1.2

A sequence aligner for short reads.

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

bowtie2 2.2.7

A tool for aligning sequence reads to long reference sequences.

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

bowtie2 2.3.4.1

A tool for aligning sequence reads to long reference sequences.

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

Bridges Open OnDeman Portal

Open OnDeman portal to the Pittsburgh Supercompting Center (PSC) Bridges HPC Resource.

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Network Service

busco 1.22

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

bwa 0.7.13

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

caffe 2020_git_9b891540

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

caffe git_2c34393f

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

caffe git_be163be0

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

caffe git_erictzeng_5ca549ce2

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

canu 1.3

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

canu 1.5

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

canu 1.6

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

canu 1.7

A fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio or Oxford Nanopore)

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

canu 1.8

A fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio or Oxford Nanopore)

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

canu 1.9

A fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio or Oxford Nanopore)

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

c-blosc 1.19.0

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

cdbfasta 2013

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

cd-hit 2016.06.21

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

centrifuge 1.0.3-beta

Classifier for metagenomic sequences

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

centrifuge 1.0.4-beta

Classifier for metagenomic sequences

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

CFITSIO 3380

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

cfour v1

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

charmm MPI

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org

checkm 1.0.7

A set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes.

Affiliation: XSEDE
Provider: Pittsburgh Supercomputing Center (PSC)
Type: Executable Software
Resource: bridges.psc.xsede.org



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