Affiliation: XSEDE

Provider: Indiana University (IU) Pervasive Technology Institute (PTI)

Type: Cloud Image

Description: Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. You write a high level configuration file specifying your inputs and analysis parameters. This input drives a parallel run that handles distributed execution, idempotent processing restarts and safe transactional steps. bcbio provides a shared community resource that handles the data processing component of sequencing analysis, providing researchers with more time to focus on the downstream biology.

Keywords: Ubuntu bioinformatics NCGAS

Quality Level: production